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Guidelines for sample preparation
procedures in GMO analysis
Prepared by the ENGL ad hoc
working group on “sample
preparation procedures”
2014
Report EUR 27021 EN
European Commission
Joint Research Centre
Institute for Health and Consumer Protection
Contact information
Molecular Biology and Genomics Unit
Address: Joint Research Centre, Via Enrico Fermi 2749, TP 201, 21027 Ispra (VA), Italy
E-mail: eurl-gmff@jrc.ec.europa.eu
Tel.: +39 0332 78 5165
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https://ec.europa.eu/jrc
Legal Notice
This publication is a Technical Report by the Joint Research Centre, the European Commission’s in-house science service.
It aims to provide evidence-based scientific support to the European policy-making process. The scientific output expressed does
not imply a policy position of the European Commission. Neither the European Commission nor any person acting on behalf of
the Commission is responsible for the use which might be made of this publication.
All images © European Union 2014
JRC94042
EUR 27021 EN
ISBN 978-92-79-44704-4 (PDF)
ISBN 978-92-79-44705-1 (print)
ISSN 1831-9424 (online)
ISSN 1018-5593 (print)
doi:10.2788/738570
Luxembourg: Publications Office of the European Union, 2014
© European Union, 2014
Reproduction is authorised provided the source is acknowledged.
Abstract
This document aims at providing guidelines for a correct sample preparation in GMO analysis on food, feed, seed, plants and
propagating material samples. It has been developed by the European Network of GMO Laboratories (ENGL), specifically by the
ENGL working group “sample preparation procedures” upon a mandate of the ENGL steering committee. The structure of the
document is based on that of an existing ISO standard (ISO 6498:2012), dealing with sample preparation for feed; starting from
this, the procedures were adapted to the needs of GMO detection and the scope concerning matrices was widen to food, feed
and seeds.
These guidelines cover the key steps of the sample preparation, i.e. the size of the laboratory sample, the mass reduction
techniques as well as techniques for comminution and mixing; considerations about the test portion are included and some
performance tests to be applied at different steps of the process are provided.
While sample preparation, falling after sampling and before analytical testing for GMOs, has suffered from a lack of guidance
and harmonization, this document provides detailed and practical hints on this important step, thus contributing to foster testing
harmonisation.
Executive summary
This document has been developed by the Members of the working group ‘sample preparation
procedures’ based on a mandate of the ENGL steering committee that is detailed in the introduction.
The general structure of the document is based on that of an existing ISO standard (ISO 6498:2012)
handling specifically about sample preparation for feed. Most of the definitions are taken from this
standard. The procedures were however adapted for GMO detection and the scope concerning
matrices is much wider (food, feed and seeds). This has an impact for instance on mass reduction
processes because risk of contamination is of more concern in GMO detection. There is a brief
reminder of the theory of sampling. Within the procedure the most important points are: the size of the
laboratory sample, the mass reduction techniques as well as techniques for comminution and for
mixing and finally considerations about the test portion. Some performance tests to be applied at
different steps of the process are provided. As a conclusion it is assessed in how far the expectations
of the mandate were addressed, gaps were identified and proposals are made for the future.
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Content
Executive summary .................................................................................................................................. i
Content .....................................................................................................................................................ii
Introduction ............................................................................................................................................. 1
1 Scope .................................................................................................................................................... 2
2 Principle ................................................................................................................................................ 2
3 Definitions ............................................................................................................................................ 2
4 General considerations related to the theory of sampling .................................................................. 4
5 Equipment ............................................................................................................................................ 8
6 Environment and rooms ..................................................................................................................... 10
7 Safety precautions .............................................................................................................................. 10
8 Procedure ........................................................................................................................................... 11
9 Performance tests (quality control) ................................................................................................... 22
10 Identified gaps and conclusions ....................................................................................................... 24
11 Bibliographic references ................................................................................................................... 26
Annex I ................................................................................................................................................... 29
Annex II .................................................................................................................................................. 30
Annex III ................................................................................................................................................. 31
Annex IV ................................................................................................................................................ 32
Annex V.................................................................................................................................................. 33
Annex VI ................................................................................................................................................ 35
Annex VII ............................................................................................................................................... 36
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