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picture1_Project Management Spread Sheet 11970 | Sample Submission Form | Sample Submission


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File: Project Management Spread Sheet 11970 | Sample Submission Form | Sample Submission
proteomics mass spectrometry core facility pmscf sample submission form contacting information name email institute dept phone group leader name billing address with unibe ref number is this a nccr rna ...

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                                      Proteomics & Mass Spectrometry Core Facility
                                                            (PMSCF)
                                                     Sample Submission Form
                    Contacting Information:
                    Name:                                                             Email:
                    Institute/Dept:                                                   Phone:
                    Group Leader name:                                                Billing address with (UniBe) REF Number:
                    Is this a NCCR RNA & Disease project:          YES       NO 
                    Date:                                                    Signature:
                    Sample information:
                    Type of requested analysis:               In-gel digestion            In-solution digestion/shotgun
                                                              Protein identification      PTM analysis
                                                              Differential protein expression analysis       Infusion/ID confirmation
                                                              Label-free analysis         Isotope labeled analysis
                                                              Targeted approach           Non-targeted approach (hypothesis-free)
                    Number of samples:                    Sample name(s):
                    Taxonomy (indicate special protein sequence database requirements):
                    Sample description (buffer, staining method, etc.):
                    Other specific requirements:              Protein fractionation by
                                                              Peptide fractionation by
                                                              Protein/Peptide concentration         Isotope labeling
                                                              Bioinformatic support:
                    PMSCF Statements:
                    Data Management Plan (DMP)
                    The University Proteomics and Mass Spectrometry Core Facility (PMSCF) produces raw tandem mass 
                    spectrometry data from protein samples provided by you, the client. The PMSCF interprets the raw data and 
                    provides statistically validated results. In this process, meta-files and results summary files are created. The 
                    results summary files are delivered to the client via a University of Bern data share. The PMSCF controls the 
                    performance of the mass spectrometry instrumentation at least before and after your samples by quality control 
                    sample runs, being either well defined synthetic peptides, low, or high complex tryptic protein digests. All raw 
                    and meta-data files, which are needed to reproduce the final results, together with the results summary file, are 
                    kept on a PMSCF internal storage server, and backed-up on the PMSCF infrastructure for at least 5 years. In the
                    process of publishing the data, the PMSCF recommends to the client to retrieve these files and upload them to a
                    public repository, like the ProteomeXchange.org. The final decisions and formulations of the research DMP 
                    remains solely in the responsibility of the client. Furthermore, it is the responsibility of the client to make sure that
                    all legal and ethical requirements are met to perform the experiment and all planned analyses, for instance 
                    samples from humans should be delivered in anonymized/pseudonymized form in order to protect personal data.
                    Legal disclaimer
                    The PMSCF applies the necessary scientific care according to current academic standards for all analytical 
                    services. However, neither the PMSCF nor the University of Bern accepts any liability for the usefulness, 
                    completeness or the industrial and commercial usability of our results and information, nor for the infringement of
                    third-party rights. Neither the PMSCF nor the University of Bern shall be liable for any damage resulting from the
                    PMSCF_sample_submission_form_V9                30. April 2021
                 use of the results and information by the client.
                 PMSCF_sample_submission_form_V9          30. April 2021
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...Proteomics mass spectrometry core facility pmscf sample submission form contacting information name email institute dept phone group leader billing address with unibe ref number is this a nccr rna disease project yes no date signature type of requested analysis in gel digestion solution shotgun protein identification ptm differential expression infusion id confirmation label free isotope labeled targeted approach non hypothesis samples s taxonomy indicate special sequence database requirements description buffer staining method etc other specific fractionation by peptide concentration labeling bioinformatic support statements data management plan dmp the university and produces raw tandem from provided you client interprets provides statistically validated results process meta files summary are created delivered to via bern share controls performance instrumentation at least before after your quality control runs being either well defined synthetic peptides low or high complex tryptic ...

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